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DNA-directed RNA polymerase II subunit RPB1, also known as RPB1, is an enzyme that is encoded by the POLR2A gene in humans. This gene encodes the largest...

RPB9. Only RPB1 strongly binds to RPB5. The RPB1 subunit also contacts RPB7, RPB10, and more weakly but most efficiently with RPB8. Once RPB1 enters the...

amplifying RPB1 especially in Ascomycota are the forward primer RPB1-Af with the sequence 5'-GARTGYCCDGGDCAYTTYGG-3', and the reverse primer RPB1-Ac-RPB1-Cr with...

of years ago (Mya). Sources: Holomycota: Tedersoo et al. (2018) [16S rRNA/Rpb1/Rpb2], Galindo et al. (2022) [phylogenomic]. Holozoa: Tikhonenkov et al....

subunits at thirteen. Archaea has the subunit corresponding to Eukaryotic Rpb1 split into two. There is no homolog to eukaryotic Rpb9 (POLR2I) in the S...

phylogenetic analyses based on ribosomal DNA and rpb2 data but not from rpb1 data. More recent analyses using genome-scale, multilocus protein sequence...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

forming a distinct clade in the internal transcribed spacer, mtSSU, and RPB1 phylogenetic analyses. The species is named in honour of Rüzgar Kağan Halıcı...

structure of the Set2-Rpb1 interacting domain of human Set2 and its interaction with the hyperphosphorylated C-terminal domain of Rpb1". Proc. Natl. Acad...

Matheny PB (April 2005). "Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales)". Mol. Phylogenet. Evol...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

nuLSU rDNA, ITS (the standard barcode), and protein-coding fragments such as RPB1/2 or β-tubulin. Multilocus trees clarified family- and order-level relationships...

of Ceriporia and related genera, using ITS, nLSU, and RNA polymerase II (rpb1) sequence data. Their analysis showed that Ceriporia sensu lato is polyphyletic...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

Chartered City, Philippines RPA9 Cabanatuan Chartered City, Philippines RPB1 Cadiz Chartered City, Philippines RPB2 Cagayan de Oro Chartered City, Philippines...

including four commonly sequenced genetic markers (ITS, mtSSU, nuLSU and RPB1), the species was included and recovered within the cetrarioid core, supporting...

establish a new set of high-ranking taxa. Trees were built using SSU rDNA, RPB1 protein, and RPB2 protein. The study once again confirmed that Microsporidia...

Cortinariaceae were shown to be polyphyletic. Additionally, phylogenetic analyses of RPB1, RPB2 and nLSU-rDNA regions from a variety of Inocybe and related taxa would...

S. (2014-07-01). "Species delimitation in Trametes: a comparison of ITS, RPB1, RPB2 and TEF1 gene phylogenies". Mycologia. 106 (4): 735–745. doi:10.3852/13-275...

eukaryotic transcription in atomic detail. The carboxyl terminal domain (CTD) of RPB1, the largest subunit of RNA polymerase II, plays an important role in bringing...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

Brandon; Liu, Yajuan J.; Ammirati, Joseph F.; Hall, Benjamin D. (2002). "Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales)"...

repeats are inviable. The CTD is an extension appended to the C terminus of RPB1, the largest subunit of RNA polymerase II. It serves as a flexible binding...

disordered repetitive sequences include the 7-mer peptide repeats found in the RPB1 subunit of RNA polymerase II, or the tandem beta-catenin or axin binding...

P. Brandon (2005). "Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales)". Molecular Phylogenetics...

pests. A multilocus phylogeny of Beauveria based on partial sequences of RPB1, RPB2, TEF and the nuclear intergenic region, Bloc, has been described to...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

TATA-binding protein (TBP) subunit of transcription factor IID, and the RPB1 subunit of RNA polymerase II. TFIIB makes sequence-specific protein-DNA interactions...

subunit, RPB1, of RNA polymerase II during both mitosis and interphase. Colocalization/interaction of QSER1 was shown to the regulatory region of RPB1 with...

Brandon; Liu, Yajuan J.; Ammirati, Joseph F.; Hall, Benjamin D. (2002). "Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales)"...

poorly resolved. Since only mtSSU data were available for the new material (RPB1 could not be sequenced), the authors took a conservative approach and relied...

of that genus. Molecular analysis of four independent DNA regions (ITS, Rpb1, beta-tubulin, and beta-actin) confirmed that it was a new species. It is...

with its host species, as well as genetic testing of the SSU, LSU, TEF, RPB1 and RPB2 nuclear loci, it has been recommended that the species be further...

transcription. PPIases target RNA polymerase II by interacting with the Rpb1 carboxy terminal domain, or CTD. Proline isomerization is then used as part...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

Brandon; Liu, Yajuan J.; Ammirati, Joseph F.; Hall, Benjamin D. (2002). "Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales)"...

analyses that combined ribosomal (nrSSU, nrLSU, mtSSU) and protein-coding (RPB1, RPB2) gene sequences from nearly every recognised class of Leotiomyceta...

disordered repetitive sequences include the 7-mer peptide repeats found in the RPB1 subunit of RNA polymerase II, or the tandem beta-catenin or axin binding...

transcribed spacer (ITS), the elongation factor EF-1α, and the RNA polymerase II (rpb1, rpb2) regions, strongly supported the monophyly of M. disparilis, with sister-clade...

nuclear ribosomal ITS, mitochondrial SSU rDNA, and the protein-coding genes RPB1 and RPB2. A 2025 revision refined the genus concept and revisited some earlier...

transcribed spacer (ITS), the elongation factor EF-1α, and the RNA polymerase II (rpb1, rpb2) regions, placed this species in the Mel-17–34 species complex, strongly...

Hertelaria, supported by morphology and multi-locus phylogenetics (ITS, mtSSU and RPB1). Lecideaceae lichens usually grow on bark, on soil, and on rocks. Collectively...

Contradictory placements exist: a six-gene multilocus study (nuLSU, nuSSU, mtSSU, RPB1, RPB2, MCM7) recovered Trizodia near Candelariomycetes, with limited support...

California. A later multigene revision of Suillus (using ITS, LSU, TEFα-1, RPB1 and RPB2 sequences) placed S. quiescens in Suillus subgenus Suillus, section...

genus name). Subsequent global sampling and a four-locus phylogeny (ITS, RPB1, EF-1α, MCM7) corroborated the placement of Dendriscosticta outside Sticta...

Among genetic markers studied, the ITS region was most variable, while RPB1 also provided phylogenetic data with minimal alignment ambiguity. In contrast...

transcribed spacer (ITS), the elongation factor EF-1α, and the RNA polymerase II (rpb1, rpb2) regions, suggests that the genus Morchella is naturally divided into...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene". Molecular Phylogenetics and Evolution. 44 (2): 812–824. doi:10.1016/j...

data then available. Later multi-locus phylogenies (nuLSU, nuSSU, mtSSU, rpb1, rpb2, tef1-α) sampling Collemopsidium and Zwackhiomyces positioned Xanthopyreniaceae...