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Phycisphaerae

Phycisphaerae
Scientific classification
Domain:	Bacteria
Phylum:	Planctomycetota
Class:	Phycisphaerae Fukunaga et al. 2010^[1]
Orders^[2]
Phycisphaerales Sedimentisphaerales Tepidisphaerales
Synonyms
"Phycisphaeria" Oren, Parte & Garrity 2016

Phycisphaerae is a class of aquatic bacteria. They reproduce by budding and are found in samples of algae in marine water.^[1] Organisms in this group are spherical^[1] and have a holdfast, at the tip of a thin cylindrical extension from the cell body called the stalk, at the nonreproductive end that helps them to attach to each other during budding.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)^[2] and National Center for Biotechnology Information (NCBI)^[3]

16S rRNA based LTP_10_2024^[4]^[5]^[6]

120 marker proteins based GTDB 09-RS220^[7]^[8]^[9]

Sedimentisphaerales

Anaerohalosphaeraceae

Anaerohalosphaera

Sedimentisphaeraceae

	Limihaloglobus

	Sedimentisphaera

Tepidisphaerales

Tepidisphaeraceae	Tepidisphaera Kovaleva et al. 2015

Phycisphaerales

Phycisphaeraceae

Poriferisphaera

	Algisphaera

	Phycisphaera

Sedimentisphaerales

Anaerohalosphaeraceae

Anaerohalosphaera Pradel et al. 2020

Sedimentisphaeraceae

	Limihaloglobus Pradel et al. 2020

	Sedimentisphaera Spring et al. 2018

Tepidisphaerales

Tepidisphaeraceae	"Humisphaera" Dedysh et al. 2021

Phycisphaerales

Phycisphaeraceae

Mucisphaera Kallscheuer et al. 2022

Poriferisphaera Kallscheuer et al. 2021

	Algisphaera Yoon, Jang & Kasai 2014

	Phycisphaera Fukunaga et al.2010

See also

References

^ ^a ^b ^c Fukunaga Y, Kurahashi M, Sakiyama Y, Ohuchi M, Yokota A, Harayama S. (2009). "Phycisphaera mikurensis gen. nov., sp. nov., isolated from a marine alga, and proposal of Phycisphaeraceae fam. nov., Phycisphaerales ord. nov. and Phycisphaerae classis nov. in the phylum Planctomycetes". J Gen Appl Microbiol. 55 (4): 267–75. doi:10.2323/jgam.55.267. PMID 19700920. Retrieved December 5, 2015.
^ ^a ^b A.C. Parte; et al. "Phycisphaerae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
^ Sayers; et al. "Phycisphaerae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
^ "The LTP". Retrieved 10 December 2024.
^ "LTP_all tree in newick format". Retrieved 10 December 2024.
^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
^ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
^ "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.

Prokaryotes: Bacteria classification

(major groups

Mesomycetozoea)

Terrabacteria
BV1, BV3, BV5

others	Actinomycetota Acidimicrobiia Actinomycetia "Aquicultoria" Coriobacteriia "Geothermincolia" "Humimicrobiia" Nitriliruptoria Rubrobacteria Thermoleophilia Armatimonadota "Abditibacteriia" Armatimonadia Chthonomonadia Fimbriimonadia "Heboniibacteriia" "Zipacnadia" "Bipolaricaulota" "Bipolaricaulia" Chloroflexota "Caldilineia" Chloroflexia Dehalococcoidia Ktedonobacteria "Limnocylindria" Deinococcota "Deinococcia" "Dormiibacterota" "Dormibacteria" "Sysuimicrobiota" "Sysuimicrobiia" Vulcanimicrobiota "Eudoremicrobiia" Vulcanimicrobiia "Xenobiia"
Cyanoprokaryota	Cyanobacteriota Cyanobacteria "Sericytochromatia" "Vampirovibrionophyceae" "Margulisiibacteriota" "Marinamargulisbacteria" "Riflemargulisbacteria" "Saganbacteria" "Termititenacia"
Firmicutes BV3 Low GC	Bacillota "Bacillia" Bacillota A "Clostridiia" "Thermoanaerobacteria" Thermosediminibacteria Bacillota D "Dethiobacteria" Natranaerobiia "Proteinivoracia" Bacillota E Sulfobacillia Symbiobacteriia Thermaerobacteria Bacillota G "Hydrogenisporia" Limnochordia "Desulfotomaculota" "Carboxydocellia" "Carboxydothermia" "Dehalobacteriia" Desulfitobacteriia Desulfotomaculia "Moorellia" Peptococcia Syntrophomonadia Thermincolia "Halanaerobiaeota" "Halanaerobiia" "Selenobacteria" "Selenomonadia"

"Elulota"
- "Elulimicrobia"
"Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"

Thermotogida

Synergistetes	Atribacterota Atribacteria "Phoenicimicrobiia" Synergistota Synergistia
Thermocalda	Caldisericota Caldisericia Coprothermobacterota Coprothermobacteria Dictyoglomerota Dictyoglomeria "Lithacetigenota" "Lithacetigenia" "Thermodesulfobiota" "Thermodesulfobiia" Thermotogota "Thermotogia" "Zhurongbacterota"

Fusobacterida

Fusobacteriota
- Fusobacteriia
"Macinerneyibacteriota"
- "Macinerneyibacteriia"
"Muiribacteriota"
- "Muiribacteriia"
"Rifleibacteriota"
- "Ozemibacteria"
"Walliibacteriota"

Hydrobacteria
BV2, BV4

Clade 1

"Aerophobota"
- "Aerophobia"
"Auribacterota"
- "Ancaeobacteria"
- "Auribacteria"
- "Erginobacteria"
- "Tritonobacteria"
"Desantisiibacteriota"
Elusimicrobiota
- Elusimicrobiia
- Endomicrobiia
"Firestoneibacteriota"
"Goldiibacteriota"
"Omnitrophota"
- "Omnitrophia"
- "Velamenicoccia"
"Ratteibacteriota"

Spirochaeto
bacteriobiontes

"Babelota"
- "Babeliae"
"Lindowiibacteriota"
Spirochaetota
- "Brevinematia"
- "Brachyspirae"
- "Exilispiria"
- "Leptospiria"
- Spirochaetia

PVC group
(Planctobacteria)

"Abyssubacteria"
Chlamydiota
- Chlamydiia
"Coatesiibacteriota"
"Hinthialibacterota"
- "Hinthialibacteria"
"Hydrogenedentota"
- "Hydrogenedentia"
Fidelibacterota
- Fidelibacteria
Planctomycetota
- "Brocadiia"
- "Phycisphaeria"
- Planctomycetia
- "Uabimicrobiia"
"Poribacteriota"
"Saltatorellota"
- "Saltatorellae"
"Sumerlaeota"
- "Sumerlaeia"
Verrucomicrobiota
- Kiritimatiellia
- Lentisphaeria
- Verrucomicrobiia

FCB group
(Sphingobacteria)

Bacteroidota
- Bacteroidia
- Chlorobiia
- "Ignavibacteriia"
- "Kapaibacteria"
- "Kryptoniia"
- Rhodothermia
Calditrichota
- Calditrichia
"Cloacimonadota"
- "Cloacimonadia"
"Cosmopoliota"
- "Cosmopolitia"
"Delongiibacteriota"
"Edwardsiibacteriota"
"Effluvivivacota"
"Eiseniibacteriota"
"Electryoneota"
- "Electryoneia"
- "Tariuqbacteria"
"Fermentibacterota"
- "Fermentibacteria"
Fibrobacterota
- Chitinivibrionia
- Fibrobacteria
- "Raymondbacteriia"
Gemmatimonadota
- Gemmatimonadia
- "Glassbacteria"
"Heilongiota"
- "Heilongiia"
"Hydrothermota"
- "Hydrothermia"
- "Stahlbacteria"
"Krumholzibacteriota"
- "Krumholzibacteriia"
"Latescibacterota"
- "Handelsmanbacteria"
- "Latescibacteria"
"Marinisomatota"
- "Marinisomatia"
"Tianyaibacteriota"
"Zixiibacteriota"

Proteobacteria
BV2

Aquificida	"Acidulidesulfobacteriota" "Acidulodesulfobacteriia" Aquificota Aquificia Desulfurobacteriia Campylobacterota "Campylobacteria" Desulfurellia "Calescibacteriota" "Calescibacteriia" Chrysiogenota Chrysiogenia "Dadaibacteriota" "Dadabacteria" Deferribacterota "Deferribacteria" Desulfobacterota G Syntrophorhabdia Thermosulfidibacterota Thermosulfidibacteria
Deltaproteobacteria	Bdellovibrionota Bacteriovoracia Bdellovibrionia Oligoflexia "Binatota" "Binatia" "Deferrimicrobiota" "Deferrimicrobiia" "Deferrisomatota" Deferrisomatia "Desulfuromonadota" Desulfuromonadia "Lernaellota" "Lernaellia" "Methylomirabilota" "Methylomirabilia" "Moduliflexota" "Moduliflexia" Myxococcota Myxococcia "Bradymonadia" Polyangiia Nitrospinota Nitrospinia Nitrospirota Nitrospiria Thermodesulfovibrionia SAR324 "Lambdaproteobacteria" "Schekmaniibacteriota" "Tectimicrobiota" "Entotheonellia" "Thermodesulfobacteriota"
others	Acidobacteriota "Acidobacteriia" "Aminicenantia" Blastocatellia "Fischerbacteria" "Guanabaribacteriia" "Holophagia" "Polarisedimenticolia" Thermoanaerobaculia Vicinamibacteria "Canglongiota" "Canglongiia" "Leptospirillaeota" "Leptospirillia" Pseudomonadota "Caulobacteria" "Mariprofundia" Magnetococcia "Pseudomonadia"

others

Source: Bergey's Manual (2001–2012)
Alternative views: Wikispecies

Taxon identifiers
Phycisphaerae	Wikidata: Q16618739 Wikispecies: Phycisphaerae CoL: 924FN GBIF: 8211192 IRMNG: 1553 ITIS: 956166 LPSN: phycisphaerae NCBI: 666505 Open Tree of Life: 822782 WoRMS: 565456

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